Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq12 288 1e-75 >seq12 Length=1112767 Score = 288 bits (318), Expect = 1e-75 Identities = 210/242 (87%), Gaps = 14/242 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| | || ||||| | |||||||||||||||| | Sbjct 45938 GTACAAAGGGCAGGGACGTAATCAACGCAATCT-GATGAATTGCGCTTACTAGGAATT-C 45995 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| ||||||||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 45996 CTCGTTCAAGTCCAACAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 46055 Query 120 ACCCGGACCTGTCGGCCAAGG-----------TGATAGACTCGTTGAATACATCAGTGTA 168 |||| ||||| |||||||||| || | ||||||||| | |||||||||| Sbjct 46056 ACCCAGACCTTTCGGCCAAGGACTTGCATTGCTGCTTTACTCGTTGACTTCATCAGTGTA 46115 Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46116 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 46175 Query 229 GT 230 || Sbjct 46176 GT 46177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999475480