Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq12 203 1e-49 >seq12 Length=1112767 Score = 203 bits (224), Expect = 1e-49 Identities = 140/157 (89%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||| Sbjct 44280 GAGTCGGGTTGTTTGGGAATGCAGCCCTAATTAGGAGGTAAATTTCTTCTAAAGCTAAAT 44221 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || ||||||||||||| ||||||| |||| |||||||||||||||||||| || Sbjct 44220 ATAAGCAAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGAAA 44161 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||| | ||||| |||||||||||||||||||||| Sbjct 44160 AGAGAG-TGAAAAGTACGTGAAATTGTTGAAAGGGAA 44125 Score = 190 bits (210), Expect = 9e-46 Identities = 243/334 (73%), Gaps = 33/334 (10%) Strand=Plus/Minus Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 ||||| ||||| || || || | ||||||||| |||||||||||||||||| |||| Sbjct 43784 GGATGTTGGCGAAAAGGCACCAATTGACCCGTCTTGAAACACGGACCAAGGAGTCCAACA 43725 Query 441 TCTATGCGAGTGTTTGGGTGTC---AAACCCGTGCGCGTAATGAAAGTGAA--------- 488 | |||||||| | |||| | |||||| | ||| |||||||||||| Sbjct 43724 TGCATGCGAGTATGTGGGAATATATAAACCCATATGCGCAATGAAAGTGAATACTTTTTT 43665 Query 489 -----------CGGAGGTGGGAACC--CGTGAGGGTGCACCATCGACCGATCCT-GAT-- 532 | ||||| || | | | ||| |||| ||||| | ||| Sbjct 43664 TTGAATGCGACCTTAGGTGATTACGGTCATCTTTGGGCAGCATCAACCGACTTTAGATAG 43605 Query 533 -GT--CTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 || ||| | || ||||||| |||||| || ||||||||||||||||||||||| Sbjct 43604 CGTTGCTTGACAAGG--TTGAGTATGAGCATGTATGCTGGGACCCGAAAGATGGTGAACT 43547 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||||||||||||||| |||||||||||||| |||| ||||| || | ||||| ||| Sbjct 43546 ATGCCTGAATAGGGTGAAGTCAGAGGAAACTCTGATGGAAGCTCGTAGAGATTCTGACGT 43487 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| ||||||||||||||||||||| Sbjct 43486 GCAAATCGATCTCCAAATTTGGGTATAGGGGCGA 43453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998455600