Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12 280 3e-73 >seq12 Length=1112767 Score = 280 bits (310), Expect = 3e-73 Identities = 225/271 (83%), Gaps = 14/271 (5%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| || | | || | || |||||||||||||||||||||||||| Sbjct 46208 GCTTCTTAGAGGGACAGTCAGTGGTTAA-CTGACGGAAGTTTGAGGCAATAACAGGTCTG 46150 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || |||||||| | Sbjct 46149 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAACGAGTAAAG 46090 Query 189 CA-----------CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGG 237 || ||||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct 46089 CAGCAATGCAAGTCCTTGGCCGAAAGGTCTGGGTAATCTTGTGAAACTTCATCGTGCTGG 46030 Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 |||||| |||||||||| ||| ||| |||||||||| |||||||||||| |||||| Sbjct 46029 GGATAGTCCATTGCAATTGTTGGACTTGAACGAGGAATTCCTAGTAAGCGCAATTCATCA 45970 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||||||||||||||||||||| Sbjct 45969 GATTGCGTTGATTACGTCCCTGCCCTTTGTA 45939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199318016