Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12 690 0.0 >seq12 Length=1112767 Score = 690 bits (764), Expect = 0.0 Identities = 487/550 (89%), Gaps = 15/550 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 41447 CTTTTGTTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 41506 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct 41507 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTTTACCAGGATC 41566 Query 127 GGCCCGCGAAGGA--CCTTAACGCCAGAAAA-TGGTCGGTGAAGACCAGTTCCGCTTCAT 183 || | || | | |||| |||||| | | | |||||| | |||||| | | || Sbjct 41567 AGCAA-CTAACGCTGCTTTAATTCCAGAAGGGTAGGCCGTGAAGCCTAGTTCCTCCTTAT 41625 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-GAAACGG------ 236 | |||||||||||||||||| |||||||||||||||||| || | | ||| Sbjct 41626 AAAATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACTTTCGACTGGAACTAAATCCA 41685 Query 237 --CTCCCACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 ||||||||||||||||| ||||| | ||| |||||||| ||| |||||||||||||| Sbjct 41686 ATCTCCCACTTATTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCT 41744 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 41745 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 41804 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41805 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 41864 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41865 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 41924 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 41925 TGGTTGAATTTCTTCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 41984 Query 534 TCACTTTCTG 543 || ||| || Sbjct 41985 CCATTTTTTG 41994 Score = 77.0 bits (84), Expect = 1e-11 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 |||||||||| ||||||||||||||||| | | |||| ||||||||| || |||||| Sbjct 55481 CCATTCATGCAGGTCACTAATTAGATGACAATGGATTTTGCTACCTTAGGATCCTCATAG 55422 Query 450 TTACTCCCGCCGTTTAC 466 ||| |||||||| || Sbjct 55421 TTAGGACCGCCGTTGAC 55405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198822656