Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 645 0.0 >seq12 Length=1112767 Score = 645 bits (714), Expect = 0.0 Identities = 456/517 (88%), Gaps = 20/517 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| ||||||| ||| | |||||| || |||||||||||||||||| Sbjct 47122 GTACTCATTCCAATTCCAAGACCAAAATG-GCCCTGGATTGTTATTTATTGTCACTACCT 47180 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 47181 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCGTT 47240 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 47241 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACCACCATGGTA 47300 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | || |||| ||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 47301 GTCCTCTATACTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATCCTTCGCCGGCT 47360 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA-------GCCCCGAAGGG 293 |||||||||||||| | | ||||||||||| |||||||| | ||||| Sbjct 47361 CAAGGCCATGCGATATGCTTAGTTATTATGATTCACCAAGTAAGAGGTTGCCCC------ 47414 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA--GCATGTA 350 | |||||||| |||||||||||| | | |||||| |||||||| || |||| ||||||| Sbjct 47415 CATTGGTTTTGTATCTAATAAATGCTCTCCTTCCAGAAGTCGGAGTGTTTAGTGCATGTA 47474 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGT--AAGGTACTATCAAATAAACGATAA 408 |||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||| Sbjct 47475 TTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAAAGGTATCATCAAATAAATTATAG 47534 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||| Sbjct 47535 CTGATATAATGAGCCATTCGCAGTTTCACTGTATAAATTTGTTTATACTTAGACATGCAT 47594 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||| Sbjct 47595 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 47631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398912512