Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capniomyces_20stellatus_20[genbank_20GCA_5F001661515.1_202016-06-10] 72 sequences; 24,845,880 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq16 201 9e-47 seq7 143 2e-29 >seq16 Length=823159 Score = 201 bits (222), Expect = 9e-47 Identities = 586/884 (66%), Gaps = 35/884 (4%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| | || | ||| |||||||||||||||||||| || |||| Sbjct 377660 TGTTCCCAATCAAGTACCATGAGGTGTGGAATATGTACAAAAAGGCGGAAGCGTCTTTCT 377601 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA---GCGTTTAT--- 61177 ||| | |||||||| ||| | || | |||| | ||||||| || || | Sbjct 377600 GGAACGCTGAGGAGGTGGATCTCTCACATGACAAAATACACTGGGAAAAGCTTTCAGAAC 377541 Query 61178 -CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGT 61236 |||||| | | || || || | | | || |||||||| || ||||| || Sbjct 377540 ACGAGCGTT-------ACTTTATCAAGAACATCCTAGCATTCTTTGCTGCCTCGGATGGA 377488 Query 61237 ATCGTCAATGAGAATTTATTG-GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCG 61295 || |||||||| || | || | | ||| || | ||||| || | | ||||| | Sbjct 377487 ATTGTCAATGAAAACCTGGTGAGCAACTTTAGCA-ATGAGGTACAGATTCCAGAGGCAAG 377429 Query 61296 TTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCT 61355 |||||||| || ||||| || || ||||| | ||| || |||||| | || Sbjct 377428 ATGTTTCTATGGGTTCCAAATCATGATTGAGAACATTCACAGCGAAATGTACTCACTGCT 377369 Query 61356 CATCGATACGTACAT-CAGGGAGCGGGCG-GAACGTGAACGAT-TGTTCAATGCCATCGA 61412 | || || ||||| || | | || | ||| |||| | |||| || || || || Sbjct 377368 GCTGGACACATACATTCAAGATGAGGCAGAGAA---GAACCACCTGTTTAACGCAATTGA 377312 Query 61413 GACGATACCG-GCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-ACCAGTACA 61470 | || ||| || || || || || | |||||| | || ||||| | | | Sbjct 377311 CAACATTCCGTGCATTGGAGAA-AAGGCAAAGTGGGCCCTGAAGTGGATTGATGACGATG 377253 Query 61471 ACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT--TTTCA 61528 | ||| |||||||||| || ||| ||| ||||| || || |||||| | || ||||| Sbjct 377252 A-GGCACCATTTGGTGAGCGTTTGGCGGCGTTTGCAGTAGTTGAGGGTATTTTCTTTTCA 377194 Query 61529 GTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCT 61588 | |||||||||| ||||| || ||| | || || | || || ||||| || || || | Sbjct 377193 G--GATCGTTTGCAGCAATTTTCTGGCTCAAAAAGAGAGGGCTGATGCCAGGACTTACAT 377136 Query 61589 TCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTAT 61648 || ||||||| | || | ||||| || || | || || ||||| | |||||| Sbjct 377135 TCTCCAATGAGCTTATTTGCCGCGATGAAGGGTTACACACAGACTTTGCCTGTCTGCTAT 377076 Query 61649 TCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGG 61708 ||| || |||| || || || |||| || | | ||||| | ||||| Sbjct 377075 TCA---GCCATCTCAGCAACAAGCCTTCTGAGGCCAAGGTCAGGGGCATTGTGCTTGAGG 377019 Query 61709 CGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGA 61768 | || || ||||| | || |||| || | ||||| || || || ||||| |||| Sbjct 377018 CTGTTGTCATTGAACAAAAGTTCTTGACAGAGTCGTTGCCAGTATCGCTGATCGGAATGA 376959 Query 61769 ATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGG 61828 | ||| ||| |||| || || ||||| ||||||||||| | ||| | | | | ||| Sbjct 376958 ACAGTGCACTGATGTGCCAATACATTGAGTTTGTTGCCGATAGACTGCTCATAGCTCTGG 376899 Query 61829 GTATGAAGCGGAT-CTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTG 61887 | || | | ||| || || | || |||||||| || |||||||||||||| || Sbjct 376898 G-ATTCTCCAAACACTACAACTCGCAGAATCCATTTGACTTTATGGACATGATTTCAATG 376840 Query 61888 GATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | |||||||| || |||||||| |||||||| |||||| || Sbjct 376839 CAAGGCAAGACCAACTTTTTCGAAAAACGTGTTTCCGACTACCA 376796 >seq7 Length=1083452 Score = 143 bits (158), Expect = 2e-29 Identities = 461/711 (65%), Gaps = 11/711 (2%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| || || |||| || || | |||||| || || | |||||| | || Sbjct 949217 ACAAACGCTGGCAGTGCAATTGACGCCAAGTTGCAAACCGCCACCTCGTCGTTTGACGTG 949158 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||||||| || || |||| ||| || || || |||| ||||| || || Sbjct 949157 TACTCGACAATCTCTGTACACAAATTGGAGCTCTTGATTGTACCCAGGTTCTGCTGGTTT 949098 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||||| |||||| ||||| ||||||| ||||||||| || || || |||| || || Sbjct 949097 GACTTGCCATTGCACGCATCTTTGTACAGCATGTACGGTGTTCCTGTTTCAATCTGCGAG 949038 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTA---CGTACCGCCCTACCTTTG 66229 || | || |||| ||| || |||| ||| | | | || || ||| || Sbjct 949037 TCCAGAATCGCGTACCACAGCTGCTGTGCTGGAACCTTCTTTCTTGCCAGCC--CCTCTG 948980 Query 66230 CGTTC--GTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATG 66287 |||| ||| | | ||| | || || || ||||| || ||| ||| || Sbjct 948979 TGTTCTCGTACTTTGTGTACAATGCCTCAAACTCCTCTCCCCAAACCTCGTGTAGATTTG 948920 Query 66288 GACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACAC--GACGCATAAA 66345 | || |||||| || | || ||| || | || ||| | ||| | |||||| Sbjct 948919 GCGCCTCGTGTGGGCAGAACAAACTCCAGTCCCTAT--TGTCCAGCACCCGCTTCATAAA 948862 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 | ||| || ||||| | | || || | || ||||| | | |||||| | ||||| Sbjct 948861 CAAATCCGGAATCCACATTCCATAAAACAAGTCACGTGCCCTGTTCTCCTCCTTTCCGTG 948802 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 || |||||||| | |||||||||||||| || |||||||| |||||||| || || Sbjct 948801 GTTCTTGCGCAAACTCAAAAACTCAAAGATGTCCGCGTGCCATGGCTCCAGGTATATCGC 948742 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525 || | || | || || |||||||| || || | || || |||||| || Sbjct 948741 AAATGCCCCTGGCCTCTTATTTCCTCCTTGGTCCACATACCTTGCTGTATGGTTGAATAC 948682 Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585 || | ||| || || | ||| || ||| | || || || || | ||| || || Sbjct 948681 TCGGAGCATTGGCACTATCCCATTCGATGTCCCGTTCGTTCCTGCTATGTACGAGTCTGT 948622 Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 ||||| || | || ||| |||||||||| || || || | ||| || || ||||| Sbjct 948621 TGCCCTGATGTTATGCACACTCAGACCAATTCCTCCTGCTGACTTTGATATCATCGCACA 948562 Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAG 66696 | || ||| | | || || ||||| |||||| ||| || ||||| Sbjct 948561 TTGCTTCAGTGTATCGTAAATCCCTTCAATAGAGTCATCCTGCATCGTCAG 948511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567651134080