Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choanephora_20cucurbitarum_20[genbank_20GCA_5F001683725.1_202016-07- 12] 2,814 sequences; 29,096,908 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq346 98.7 2e-18 >seq346 Length=3046 Score = 98.7 bits (108), Expect = 2e-18 Identities = 101/128 (79%), Gaps = 8/128 (6%) Strand=Plus/Plus Query 87 CCTATTAG-TGGGTGAACAATCCAACGCTTACC-----GAATTCTGCTTCGGTATGATAG 140 |||||| | | |||| || |||||||||| | ||||||||| || ||||| Sbjct 2402 CCTATTTGGTAGGTGCACTATCCAACGCTGGGCTCCTAGAATTCTGCAAAATTAGGATAG 2461 Query 141 GAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG-CCACAA 199 ||||| | |||| ||| |||||||||||||||||||||||||||||||||| || ||| Sbjct 2462 -AAGAGTCCGCATCAAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCCTCAA 2520 Query 200 GCCAGTTA 207 |||||||| Sbjct 2521 GCCAGTTA 2528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854375957184