Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choanephora_20cucurbitarum_20[genbank_20GCA_5F001683725.1_202016-07- 12] 2,814 sequences; 29,096,908 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2400 84.2 5e-14 >seq2400 Length=15573 Score = 84.2 bits (92), Expect = 5e-14 Identities = 80/100 (80%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 239 GGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 ||||||||| ||| || ||| | |||||| |||||| |||||| ||||||||||| Sbjct 6035 GGCGAAGGCTTCTTTCTA-ACTAAACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAA 5977 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||| |||| |||||||| ||||||||||||| Sbjct 5976 ACGGATTAGAGACCCGTGTAGTCCATACCGTAAACGATGA 5937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203166141952