Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongronella_20sp._20w5_20[genbank_20GCA_5F001650995.1_202016-05-24] 149 sequences; 34,723,466 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq51 430 4e-118 seq1 208 2e-51 seq14 203 1e-49 seq61 199 1e-48 >seq51 Length=272779 Score = 430 bits (476), Expect = 4e-118 Identities = 376/454 (83%), Gaps = 18/454 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| ||| ||| |||| || ||| || |||||||||||||||||| Sbjct 269821 GTACTCATTCCAATTGCAAAACCTGAAAG-GCTCTGCATTGTTATTTATTGTCACTACCT 269763 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269762 CCCCGAATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 269703 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGT 179 |||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||| Sbjct 269702 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTCACCCGT-GATAGCCATGGT 269644 Query 180 AGGCCACTATCCTACCATCGAAAGT-TGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 | ||||||| | ||||||| |||| |||||||||||||| | ||||||||| ||||||| Sbjct 269643 AAGCCACTACCTTACCATCAAAAGCCTGATAGGGCAGAAAATCGAATGAACCGTCGCCGG 269584 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-GAGCCCCGA----AGGG 293 | |||||||||||||| || | | ||||||||| ||||||| || || | ||| Sbjct 269583 CACAAGGCCATGCGATCCGCTTAATTATTATGATTCACCAAAAGAAACCTGTTTCCAGGC 269524 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTAT 351 ||||| ||| ||||||||| | || | ||| ||| ||||| |||||||| Sbjct 269523 TGTTGGCTTTG-ATCTAATAAGTGCAGAG-TGCCGTAAAGCACCCCTTTTTTGCATGTAT 269466 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGT--AAGGTAC--TATCAAATAAACGATA 407 ||||||||||||||||||||||||||| |||| || ||| | || || | ||| Sbjct 269465 TAGCTCTAGAATTACCACGGTTATCCA-ATAGTAAAAAATACATTGCCATGTAGATCATA 269407 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 |||||||||||||||||||||||||||| ||||| Sbjct 269406 ACTGATTTAATGAGCCATTCGCAGTTTCGCTGTA 269373 >seq1 Length=1252801 Score = 208 bits (230), Expect = 2e-51 Identities = 150/170 (88%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG--TACTAT-- 394 |||| ||||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct 43014 TTTTTGCATGTATTAGCTCTAGAATTACCACGGTTATCCAA-TAGTAAAAAATACATTGC 43072 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 || || | ||||||||||||||||||||||||||||||| ||||| | ||||||| || Sbjct 43073 CATGTAGATCATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTAAAAATTGCTTTTA 43132 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43133 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 43182 >seq14 Length=634118 Score = 203 bits (224), Expect = 1e-49 Identities = 149/170 (88%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG--TACTAT-- 394 ||||| ||||||||||||||||||||||||||||||||| |||||| ||| | Sbjct 80074 TTTTACTATGTATTAGCTCTAGAATTACCACGGTTATCCAA-TAGTAAAAAATACATTGC 80016 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 || || | ||||||||||||||||||||||||||||||| ||||| | ||||||| || Sbjct 80015 CATGTAGATCATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTAAAAATTGCTTTTA 79956 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 79955 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 79906 >seq61 Length=186913 Score = 199 bits (220), Expect = 1e-48 Identities = 148/170 (87%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG--TACTAT-- 394 ||||| |||||||||||||||||||||||||||||||| |||||| ||| | Sbjct 3061 TTTTACTGTGTATTAGCTCTAGAATTACCACGGTTATCCAA-TAGTAAAAAATACATTGC 3003 Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 || || | ||||||||||||||||||||||||||||||| ||||| | ||||||| || Sbjct 3002 CATGTAGATCATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTAAAAATTGCTTTTA 2943 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2942 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 2893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397749504