Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq107 95.1 7e-18 seq105 95.1 7e-18 seq102 95.1 7e-18 seq101 95.1 7e-18 seq98 95.1 7e-18 seq97 95.1 7e-18 seq96 95.1 7e-18 seq91 95.1 7e-18 seq89 95.1 7e-18 seq63 95.1 7e-18 seq24 95.1 7e-18 >seq107 Length=7710 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 4145 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 4088 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 4087 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 4031 >seq105 Length=8653 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 3555 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 3498 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 3497 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 3441 >seq102 Length=9586 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 1278 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 1221 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1220 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 1164 >seq101 Length=9813 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 3878 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 3821 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 3820 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 3764 >seq98 Length=10417 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 1350 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 1407 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1408 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 1464 >seq97 Length=11606 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 10828 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 10771 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 10770 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 10714 Score = 80.6 bits (88), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCCCGAT 63 ||||||||||| ||||| | |||| ||||| | || |||| || | || ||| Sbjct 388 CCAAAGACTTT-ATTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC--GAT 333 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct 332 CGCTAGTCGGCATAGTTTGTGGTTA-GACTACGACGGTATCTAATCGTCTTCGA 280 >seq96 Length=11773 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 7414 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 7357 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 7356 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 7300 >seq91 Length=14767 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 3725 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 3668 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 3667 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 3611 Score = 87.8 bits (96), Expect = 1e-15 Identities = 93/118 (79%), Gaps = 5/118 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 11699 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 11642 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct 11641 -GATCGCTAGTCG-CATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 11586 >seq89 Length=17026 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 2693 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 2636 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 2635 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 2579 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 10752 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 10695 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 10694 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 10638 >seq63 Length=123214 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 121354 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 121297 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 121296 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 121240 >seq24 Length=527347 Score = 95.1 bits (104), Expect = 7e-18 Identities = 94/118 (80%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCG-AGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||||| |||| | |||| ||||| | || |||| || | || Sbjct 525686 GAACCCAAAGACTTTACTTTCGC-TAAGCTGCCGCATAGAACAAAAAAAGTATCCATGC- 525743 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 525744 -GATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 525800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399702460