Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq51 73.4 6e-11 >seq51 Length=238943 Score = 73.4 bits (80), Expect = 6e-11 Identities = 104/145 (72%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 35 TTCGCGCGCTTTTTTCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGAC 94 || |||| ||| || ||| ||||| ||||| || |||||||| | || || || |||| Sbjct 98196 TTGGCGCACTTCTTCGGTC-AGGCCGGGTGCAGGAGCTTCTTCAATCACTTTTTGATGAC 98254 Query 95 GACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACA 154 ||||||| | |||||||| || ||| || || | || || ||| | ||| | | Sbjct 98255 GACGTTGAACGGAGCAATCACGTTCGAACAAATGCACGGTGTTACCCAGCTGGTCAGCAA 98314 Query 155 GTACTTGCACTTCCACGTGACGTGG 179 ||||| ||||| |||||||| || Sbjct 98315 ACACTTGGACTTCGACGTGACGAGG 98339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735999187180