Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq108 116 6e-24 seq105 116 6e-24 seq102 116 6e-24 seq101 116 6e-24 seq98 116 6e-24 seq97 116 6e-24 seq96 116 6e-24 seq91 116 6e-24 seq89 116 6e-24 seq58 116 6e-24 seq51 116 6e-24 seq24 116 6e-24 seq4 116 6e-24 seq93 111 3e-22 seq29 107 3e-21 >seq108 Length=6043 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 3042 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 3099 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 3100 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 3157 >seq105 Length=8653 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 7930 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 7987 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 7988 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 8045 >seq102 Length=9586 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 5645 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 5702 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 5703 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 5760 >seq101 Length=9813 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 8248 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 8305 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 8306 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 8363 >seq98 Length=10417 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 6021 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 5964 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 5963 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 5906 >seq97 Length=11606 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 4755 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 4812 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 4813 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 4870 >seq96 Length=11773 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 3702 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 3759 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 3760 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 3817 >seq91 Length=14767 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 118 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 175 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 176 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 233 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 8095 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 8152 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 8153 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 8210 >seq89 Length=17026 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 7065 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 7122 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 7123 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 7180 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 15119 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 15176 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 15177 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 15234 >seq58 Length=142724 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 139193 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 139250 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 139251 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 139308 >seq51 Length=238943 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 3993 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 4050 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 4051 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 4108 >seq24 Length=527347 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 521321 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 521264 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 521263 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 521206 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 513176 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 513119 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | |||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 513118 GGTGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 513061 >seq4 Length=4532 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||| ||| || | | || | Sbjct 3178 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 3235 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 3236 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 3293 >seq93 Length=823784 Score = 111 bits (122), Expect = 3e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| ||||| || |||||| ||| || | | || | Sbjct 652232 GTACGAGAGGAACC-CTTCATTCAGA-TAATTAGTATTTGCGCCTGATCGAACGGTCAAT 652175 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 652174 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGTTGGAATCCATGC 652117 >seq29 Length=457685 Score = 107 bits (118), Expect = 3e-21 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||| | | | ||||||| |||||||| |||||| ||| || | | || | Sbjct 456613 GTACGAGAGGGAACCCTTCATTCAGA-TAATTGGTATTTGCGCCTGATCGAACGGTCAAT 456671 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| Sbjct 456672 GGCGCGAAGCTACCATCTGCTGGATAACAGCTGAACGCCTCTAAGT-GGAATCCATGC 456728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199095296