Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hesseltinella_20vesiculosa_20[genbank_20GCA_5F002104935.1_202017-04- 20] 114 sequences; 27,216,191 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq56 131 2e-25 >seq56 Length=149020 Score = 131 bits (144), Expect = 2e-25 Identities = 243/347 (70%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 162495 GGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAA 162554 ||| || || || || ||||||||||| | || || || || || ||||| || || || Sbjct 79045 GGAAACTCCTCAAAAGGAAACCACTCCCTTCTACCCTCGTTCTCCCTATGGTGTGGCCAA 78986 Query 162555 ACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAG 162614 || || || | ||||||| | |||||| | ||| ||| |||| ||||| || Sbjct 78985 GCTGTACGGTTACTGGATCGTTGTCAACTACCGTGAATCCTACAACATGTTTGCCTGTAA 78926 Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||||||||| ||||| |||||| | ||| | || || || ||||| |||||||| Sbjct 78925 CGGTATTCTGTTCAACCACGAATCTCCCCGCCGTGGCCGTACCTTTGTCACCCGCAAGAT 78866 Query 162675 CGTCCGAGCCTTGTC-CCGA-ATTAGTGTGGGAC-TCCAAAGTGATCTACAACTT-GGAA 162730 | ||| ||| ||| | || || | |||| | || | | || || |||| || | Sbjct 78865 CACCCGTGCC--GTCGCTGACATCCATTTGGGCCGTCAAGAATG--CTTGTACTTGGGTA 78810 Query 162731 ACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGA 162790 || || ||||| ||||| ||||| || ||| ||||| || || | ||||||||||| Sbjct 78809 ACATCGATGCCAAGCGTGATTGGGGTCATGCCCGTGACTATGTCGAAGGTATGTGGTTGA 78750 Query 162791 TGCTTCAGCAAG-AGAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 || | || |||| ||||||| ||||| | ||| | || || ||||| Sbjct 78749 TGTTGCAACAAGAAGAAGCC-GATGACTTTGTCTTGGCCACCGGTGA 78704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458214670640