Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq138 219 6e-55 >seq138 Length=10184 Score = 219 bits (242), Expect = 6e-55 Identities = 201/250 (80%), Gaps = 13/250 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| ||| ||||||| |||| | Sbjct 5967 GTACAAAGGGCAGGGACGTAATCATCGCAAGCT-GATGACTTGCGATTACTAGAAATT-C 5910 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | || | | |||||| | | ||||||| |||||||| ||| ||||||| Sbjct 5909 CTCGTTCATGTCCGAAAGTTGCAAAGGACAATCCCCAGCACGATGAGGTTTACAAGATTA 5850 Query 121 CCCGGACCTGTCGGCCAAGGTG------ATAG----ACTCGTTGAATACATCAGTGTAGC 170 |||| ||| |||| | ||| | || ||||| ||| |||||||||||| Sbjct 5849 CCCGATCCTATCGGACCAGGAACGCCAAAAAGGCTAACTCGCTGACCTCATCAGTGTAGC 5790 Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG- 229 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5789 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCCGC 5730 Query 230 TGGCCTAAAA 239 |||| | ||| Sbjct 5729 TGGCTTGAAA 5720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998346305