Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq138 167 1e-38 >seq138 Length=10184 Score = 167 bits (184), Expect = 1e-38 Identities = 224/304 (74%), Gaps = 26/304 (9%) Strand=Plus/Plus Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461 || || ||||||||| |||||||||||||||||||||| | | |||||| ||||| Sbjct 7565 AAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAACTTGTGCGCGAGTCAATGGGTTG 7624 Query 462 C-AAACCCGTGCGCGTAATGAAAGTGA--ACGGAGGTG---GGAACC---CGTGAG---- 508 | |||| | ||| ||||||||||| || || || ||| ||| Sbjct 7625 CTAAACTCACTGGCGCAATGAAAGTGAGAACTTTTGTTCCTGGTACCAACCGTTTAACCG 7684 Query 509 -GGTGCACCATCGACCGATCCTGATG--TCTTCGGATGGATT----TGAGTAAGAGC--A 559 |||||| ||| |||| || || |||| | |||| ||||| |||| | Sbjct 7685 CGGTGCAGTATCCACCGG--CTAATTGCTCTTTAGGGTGATTGGACTGAGTGCGAGCGCA 7742 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 ||| | | ||||||||||||||||||||||| | || ||||| |||||||| |||||| Sbjct 7743 TAG--GCTAGGACCCGAAAGATGGTGAACTATACTTGGGTAGGGCGAAGCCAGGGGAAAC 7800 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| |||||||||||||||| || || |||||||| Sbjct 7801 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTAGAACCTGAGTATAGGG 7860 Query 680 GCGA 683 |||| Sbjct 7861 GCGA 7864 Score = 150 bits (166), Expect = 7e-34 Identities = 136/169 (80%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 ||||||| |||||||||||||||||| |||| |||||||| |||| || |||||| Sbjct 7114 CGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGAGGTACGCACCTTCCAAGGCTAAA 7173 Query 99 TATT--GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 |||| ||| |||||||||||||| ||||||| |||| ||||| ||||||| ||| || Sbjct 7174 TATTCAGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGTACTCTG 7233 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 || |||||| | |||||| ||||||| || |||||| |||||||| Sbjct 7234 GAGAGAGAG-TGAAAAGCGCGTGAAACCATTAGTAGGGAACCGCTTGCA 7281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995130850