Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq138 580 4e-163 >seq138 Length=10184 Score = 580 bits (642), Expect = 4e-163 Identities = 449/528 (85%), Gaps = 12/528 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||| ||||| ||||||||||||||| |||| ||||||| ||||||||||||||| Sbjct 9691 CTTTTGCGCTACATGAGATTTCTGTTCTCATTGAGCCCCCCTTTGGACACCTGCGTTATT 9632 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||| | ||||||||| ||| || || Sbjct 9631 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCAGACAATGTCTCTGACCAGGGTC 9572 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCG-CTTCATTG 185 || |||||| |||| || | || ||| | | ||| ||| | || Sbjct 9571 TCCC---GAAGGA--TTAATGCTAAAA----GTCTGCTT-GCGCAGCTCCCTCACCACCA 9522 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 |||||| | || || |||||||||||||||| || || | ||||||||| Sbjct 9521 GATAAGTAGAGCGACAATGGAGGTAGTGGTATTTCACCGTCGGGCAAGCC-CTCCCACTT 9463 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||||||| || |||| | ||||| ||| |||||||||||||||||||||||||| Sbjct 9462 ATTCTACACCCTCCATGTCACTCCACAATGTCTAACTAGAGTCAAGCTCAACAGGGTCTT 9403 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 9402 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAAGT 9343 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 9342 AGGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 9283 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 9282 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTC 9223 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 9222 TTCACGGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 9175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196288096