Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq138 583 3e-164 >seq138 Length=10184 Score = 583 bits (646), Expect = 3e-164 Identities = 443/514 (86%), Gaps = 13/514 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||| |||| ||||||||||| | |||||| | |||||||||||||||||| Sbjct 4831 GTACTCATTGCAATCCCAAGACCCAAAGG-GCCCTGGGTTGTTATTTATTGTCACTACCT 4773 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | | |||| | |||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 4772 CACTGTGTTAGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCGTT 4713 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct 4712 TCTCAGGCTCCCTCTCCGGAATCAAACCCTGATTCCCCGTTACCCGTTGTCACCATGGTA 4653 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| | ||||||||| |||||||||||||||||||||||||| ||| || | | Sbjct 4652 GGCCACTACCGTACCATCGACAGTTGATAGGGCAGAAATTTGAATGACCCACCGTCTCCA 4593 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCG-TTG 298 | || || || |||| | ||||||||||| ||||| || ||||||| || | ||| Sbjct 4592 TACGGACA--CGGTTCGCTCAGTTATTATGATTCACCGAAATCTCCCCGAAAGGAGTTTG 4535 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGA---AGTCGGG-GTTTTTAGCATGTATTAG 354 ||||| |||||||||||| || ||||||||| ||||||| ||| ||||||||||| Sbjct 4534 GTTTTATATCTAATAAATGCAGCCCTTCCGAAACAGTCGGGCCTTTCGCGCATGTATTAG 4475 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTA---AGGTACTATCAAATAAACGATAACTG 411 ||||||||||||||||| |||||| || ||| ||||| |||||||||| ||||||| Sbjct 4474 CTCTAGAATTACCACGGGTATCCAAGTGGTATGCGGGTACAGTCAAATAAACTATAACTG 4415 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGC 470 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 4414 ATATAATGAGCCATTCGCAGTTTCACTGTATAGACTTGCTTATACTTAGACATGCATGGC 4355 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| |||||||||||||||||||||| Sbjct 4354 TTAATCTTTGACACAAGCATATGACTACTGGCAG 4321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396571392