Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq162 87.8 7e-12 seq224 84.2 9e-11 seq57 84.2 9e-11 >seq162 Length=1352108 Score = 87.8 bits (96), Expect = 7e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||| ||||||||| | | |||||||||||||||||||| || | | ||| | Sbjct 1313113 GTCATTCGCGACGGGAAACCGTGCGGGTTCATGATGATGTCCGGGAACACACCGCGGTCC 1313172 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 |||| ||||||||||| | | || | | ||| |||||||||||||| || || Sbjct 1313173 GTGAACGGCATGTCCTCCTGCTGCACAATGATGCCACACACGCCCTTCTGGCCATGTCGA 1313232 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGAT 449181 | |||||||| || |||||||| ||| || ||||||| || |||||| Sbjct 1313233 GACGAAAACTTGTCGCCAAGCTCGGGCCGGCGCGTCTGCCGCAGCAGGAACTTGAT 1313288 >seq224 Length=36005 Score = 84.2 bits (92), Expect = 9e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064 |||||| |||||||| ||| |||||||| ||||||||||||||| | |||| | || Sbjct 29993 GGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTCGGGCACCACGCCCTCGGC 29934 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 ||| ||||||||||||| | | | | ||| | ||||||||||||||| || Sbjct 29933 CGAGAACGGCATGTCCTCGGTGCGGTACGTGATGCCAATAGTGCCCTTCTGGCCGTGTCG 29874 Query 449125 -GCTGCAGAACTTGTCCCCC 449143 | ||| |||||||| ||| Sbjct 29873 CGACGCA-AACTTGTCGCCC 29855 >seq57 Length=497762 Score = 84.2 bits (92), Expect = 9e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064 |||||| |||||||| ||| |||||||| ||||||||||||||| | |||| | || Sbjct 209556 GGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTCGGGCACCACGCCCTCGGC 209497 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 ||| ||||||||||||| | | | | ||| | ||||||||||||||| || Sbjct 209496 CGAGAACGGCATGTCCTCGGTGCGGTACGTGATGCCAATAGTGCCCTTCTGGCCGTGTCG 209437 Query 449125 -GCTGCAGAACTTGTCCCCC 449143 | ||| |||||||| ||| Sbjct 209436 CGACGCA-AACTTGTCGCCC 209418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084732988780146