Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq224 105 3e-17 seq57 105 3e-17 >seq224 Length=36005 Score = 105 bits (116), Expect = 3e-17 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | ||||||||||||||||| ||||||| ||| Sbjct 29998 CCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTCGGGCACCACGCCC 29939 Query 364484 TCAGCGGTAAAGGGCATATCTTCGG-GAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || | || ||||| || |||| | || ||| ||| ||||| || ||||| || | Sbjct 29938 TCGGCCGAGAACGGCATGTCCTCGGTGCGGTACG-TGATGCCAATAGTGCCCTTCTGGCC 29880 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || |||||||||||||| || Sbjct 29879 GTGTCGCGACGCAAACTTGTCGCCCAT 29853 >seq57 Length=497762 Score = 105 bits (116), Expect = 3e-17 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | ||||||||||||||||| ||||||| ||| Sbjct 209561 CCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTCGGGCACCACGCCC 209502 Query 364484 TCAGCGGTAAAGGGCATATCTTCGG-GAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || | || ||||| || |||| | || ||| ||| ||||| || ||||| || | Sbjct 209501 TCGGCCGAGAACGGCATGTCCTCGGTGCGGTACG-TGATGCCAATAGTGCCCTTCTGGCC 209443 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || |||||||||||||| || Sbjct 209442 GTGTCGCGACGCAAACTTGTCGCCCAT 209416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884880917925711