Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq29 141 5e-32 seq80 138 6e-31 >seq29 Length=11094 Score = 141 bits (156), Expect = 5e-32 Identities = 102/117 (87%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||||| | | ||||||| | | | | | | Sbjct 4432 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCAAACAAGTCAAATT---ATCCTTGTCT 4488 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4489 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 4545 >seq80 Length=335032 Score = 138 bits (152), Expect = 6e-31 Identities = 101/117 (86%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||||| | | ||||||| | | | | | | Sbjct 233951 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCAAACAAGTCAAATT---ATCCTTGTCT 233895 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 233894 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATTGTCTTCGA 233838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399639820