Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq29 360 3e-97 seq80 224 2e-56 >seq29 Length=11094 Score = 360 bits (398), Expect = 3e-97 Identities = 265/305 (87%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT 73 ||| ||| |||||||| || | | | || || ||| ||| | | |||| |||||||| Sbjct 4849 GGGTCTTCCCTTCTGGTGAGCTGTCGTGTTGTTTACTCAGTGCGGCAGGGAACCAGGACT 4790 Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||| Sbjct 4789 TTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCATTCGCTTGAATACATTAGCATGGA 4730 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||| Sbjct 4729 ATAATAAAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGATTAA 4671 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||||||| ||||| | |||||| |||||||||||||||||||||||||||||| | Sbjct 4670 TAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTTATGAA 4611 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||||||||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 4610 AGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 4552 Query 314 AGGGG 318 ||||| Sbjct 4551 AGGGG 4547 >seq80 Length=335032 Score = 224 bits (248), Expect = 2e-56 Identities = 170/198 (86%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 45 TTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGC 104 || ||| ||| | | |||| ||| |||||||| |||||||||||||||| ||| ||||| Sbjct 233613 TTTACTCAGTGCGGCAGGGAACCAAGACTTTTATTTTGAAAAAATTAGAG-GTTTAAAGC 233671 Query 105 AGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164 | || || ||| ||||||||||||||||||||||| |||||||| | |||||||||||| Sbjct 233672 ATGCATTCGCTTGAATACATTAGCATGGAATAATAAAATAGGACTTT-GGTTCTATTTTG 233730 Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224 ||||||||||||||| | ||||||||||||||||||| ||||| | |||||| |||| Sbjct 233731 TTGGTTTCTAGGACCAAAGCAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATT 233790 Query 225 GTCAGAGGTGAAATTCTT 242 |||||||||||||||||| Sbjct 233791 GTCAGAGGTGAAATTCTT 233808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198737024