Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq29 342 8e-92 seq80 158 2e-36 >seq29 Length=11094 Score = 342 bits (378), Expect = 8e-92 Identities = 230/257 (89%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4048 ACTCGCTGACTTGATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4107 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||||| || || ||||||||||||||||||| | Sbjct 4108 CCTGTTATTGCCTCAAACTTCCATTGACTAATAGTCAATAGTCCCTCTAAGAAGTTGACG 4167 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||||| | || | |||||||||||||||||||||||||||||| ||||||||| Sbjct 4168 ACCAACAAACGTTGGCCTAACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAA 4227 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4228 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 4287 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 4288 AGAGCTCTCAATCTGTC 4304 >seq80 Length=335032 Score = 158 bits (174), Expect = 2e-36 Identities = 100/108 (93%), Gaps = 4/108 (4%) Strand=Plus/Minus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 |||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct 234182 AGGTTAAGGTCTCGTT----AACGGAATTAACCAGACAAATCACTCCACCAACCAAGAAC 234127 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 234126 GGTCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 234079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798934778