Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq29 143 3e-32 seq80 122 1e-25 >seq29 Length=11094 Score = 143 bits (158), Expect = 3e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| Sbjct 4689 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTAATGTATTCA 4747 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 ||| | ||||||||| |||||||||||||| |||| ||||||||||||||||| Sbjct 4748 AGCGAATGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCC 4801 >seq80 Length=335032 Score = 122 bits (134), Expect = 1e-25 Identities = 97/114 (85%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||||| ||||||||||||||||||||||| Sbjct 233741 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTTTATTATTCCATGCTAATGTATTCA 233683 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 ||| | || |||||| ||| |||||||||| |||| |||||||| ||||||| Sbjct 233682 AGCGAATGCATGCTTTAAAC-CTCTAATTTTTTCAAAATAAAAGTCTTGGTTCC 233630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199204292