Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq29 237 2e-60 seq80 196 5e-48 >seq29 Length=11094 Score = 237 bits (262), Expect = 2e-60 Identities = 168/190 (88%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||| ||||||||| || ||| ||||| Sbjct 4801 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCATTCGCTTGAATA 4742 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| |||||||| | ||||||||||||| |||||||||||||| Sbjct 4741 CATTAGCATGGAATAATAAAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG- 4684 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| |||||||| ||||||||||| Sbjct 4683 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTC 4624 Query 181 TTGGATTTAT 190 |||||||||| Sbjct 4623 TTGGATTTAT 4614 >seq80 Length=335032 Score = 196 bits (216), Expect = 5e-48 Identities = 155/182 (85%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||| |||||||| |||||||||||||||| ||| |||||| || || ||| ||||| Sbjct 233630 GGAACCAAGACTTTTATTTTGAAAAAATTAGAG-GTTTAAAGCATGCATTCGCTTGAATA 233688 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| |||||||| | ||||||||||||| ||||||||||||| Sbjct 233689 CATTAGCATGGAATAATAAAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCAA 233747 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||||| |||| ||||||| ||||| | |||||| |||||||| ||||||||||| Sbjct 233748 A-GCAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTC 233806 Query 181 TT 182 || Sbjct 233807 TT 233808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999315520