Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq29 737 0.0 seq80 549 6e-154 >seq29 Length=11094 Score = 737 bits (816), Expect = 0.0 Identities = 469/506 (93%), Gaps = 4/506 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct 5017 GTACTCATTCCAATTACAAGACTAAAAAG--CCCTGTATTGTTATTTATTGTCACTACCT 5074 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5075 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5134 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 5135 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 5194 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 5195 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCAGCT 5254 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| ||||||||||||||||||| | ||| ||||||| Sbjct 5255 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCACCAGACAAGCGGTTGCCCGCGTTGG 5314 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358 |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 5315 TTTTTTATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTAGCATGTATTAGCTCT 5374 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 5375 AGAATTACCACGGTTATCCAAGTAGTAAGGTATAATCAAATAAACTATAACTGATTTAAT 5434 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||| ||| | || | ||||||||||||||||||||||||||||| Sbjct 5435 GAGCCATTCGCAGTTTCACAGTACAAATCGTTTATACTTAGACATGCATGGCTTAATCTT 5494 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 5495 TGAGACAAGCATATGACTACTGGCAG 5520 >seq80 Length=335032 Score = 549 bits (608), Expect = 6e-154 Identities = 425/502 (85%), Gaps = 19/502 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||| ||||||||||| | | | ||| |||||||||| ||||||||| |||||||| Sbjct 233415 GTATTCATTCCAATTGCGA----CTAAAAAGCCCTGTATTGCTATTTATTGGCACTACCT 233360 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||| ||||||||||||||| ||||||| ||||||||||||||||||||| || | || Sbjct 233359 CCCCATGTCGGGATTGGGTATTTTGCGCACCTGCTGCCTTCCTTGGATGTAGT---CATT 233303 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| Sbjct 233302 TCTCAGGCTCCCTCTCCGGAATCGAACTCTAATTCCCCGTTACCCGTTAAAACCATGGTA 233243 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||| Sbjct 233242 GGCCTCTATCCTACCATCGAAAGTTGATAAGGCAGAAATTTGAATGAAACATAGCCAGCT 233183 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGCCCCGAAGGGCGTTGG 299 ||||||||| ||||||| ||||||||||||||||||| | ||| ||||||| Sbjct 233182 CAAGGCCATACGATTCGAAAAGTTATTATGAATCACCAGACAAGCGGTTGCCCGCGTTGG 233123 Query 300 TTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358 |||||||||||||||||||| ||||| | |||||| || |||||||||||||||||||| Sbjct 233122 TTTTTTATCTAATAAATACATCCCCTCCAGAAGTC-AGGATTTTAGCATGTATTAGCTCT 233064 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||| ||||||||||| ||||||||||| | ||||||||| ||| |||||||||| Sbjct 233063 AGAATTACTACGGTTATCCAAGTAGTAAGGTATGACCAAATAAACTATAGCTGATTTAAT 233004 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||| ||||||||| ||| | || | ||||||||| ||| | |||| Sbjct 233003 GAGCCATTCCCAGTTTCACAGTACAAATCGTTTATACTTA---------GGCCTTTTCTT 232953 Query 479 TGAGACAAGCATATGACTACTG 500 ||||||||||||| || || || Sbjct 232952 TGAGACAAGCATACGAATAATG 232931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397915648