Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq79 118 1e-21 >seq79 Length=364526 Score = 118 bits (130), Expect = 1e-21 Identities = 249/367 (68%), Gaps = 6/367 (2%) Strand=Plus/Plus Query 162474 TGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACG 162533 |||| | || || | ||||||||||| ||||||| ||||||||||| | ||||| || Sbjct 32385 TGAGTTGTACGGTCAAGTTCAGGAGATTCCCCAGAGCGAAACCACTCCTTTCTATCCTCG 32444 Query 162534 ATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAG 162593 || || ||||| ||||| || | || | | |||||||| |||||| | || Sbjct 32445 CTCACCCTATGGTGTTGCCAAGTTGTACGCCTACTGGATCACTGTCAACTACCGCGAGGC 32504 Query 162594 CTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGA 162653 ||| |||| |||| | | |||||| || ||||| ||||| | ||| | || Sbjct 32505 CTACAACATGTATGCTTGCAACGGTATCCTCTTCAACCACGAGTCACCCCGCCGTGGCCG 32564 Query 162654 GACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCC--GAAT-TAGTGTGGGACTCCA 162710 || |||||||| ||||||||| | | || |||| | ||| ||| || | | | Sbjct 32565 TACCTTCGTCACCCGCAAGATCACCTGCGC--TGTCGCTTCAATCAAGTTGGGCAAGCAA 32622 Query 162711 AAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTA 162770 |||| || | || |||||| | ||||| ||||| ||||| || ||| || || Sbjct 32623 GAGTG-CCTTTACCTCGGAAACTTGGATGCCAAGCGTGATTGGGGTCATGCCCGCGATTA 32681 Query 162771 CGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAAC 162830 || |||| ||||||| ||||| ||||| |||| || || || | ||| | || || Sbjct 32682 TGTTGAGGGTATGTGGAGAATGCTCCAGCAGGAGAGTCCTGAGGACTTTGTCCTGGCCAC 32741 Query 162831 TGGTGAG 162837 || ||| Sbjct 32742 AGGAGAG 32748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458007232880