Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq211 255 1e-65 seq61 114 2e-23 >seq211 Length=6561 Score = 255 bits (282), Expect = 1e-65 Identities = 172/190 (91%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 2205 ATGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATG 2263 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||||||| ||||| | |||||| |||||||||||||||||||||||||||| Sbjct 2264 ATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTT 2323 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || |||||||||| |||||||||| || |||||||||||||||||||||| |||||| Sbjct 2324 ATGAAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 2382 Query 309 AAGTTAGGGG 318 |||||||||| Sbjct 2383 AAGTTAGGGG 2392 Score = 226 bits (250), Expect = 5e-57 Identities = 174/204 (85%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15 GGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT 73 ||||||| |||||||| || | | | || || ||| | | | | |||| |||||||| Sbjct 2001 GGGCCTTACCTTCTGGTGAGCTGTCGTGTTGTTTACTCAGCGCGGCAGGGAACCAGGACT 2060 Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||| Sbjct 2061 TTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCATTCGCTTGAATACATTAGCATGGA 2120 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| Sbjct 2121 ATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGATTAA 2179 Query 194 TAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||| ||||| | |||| Sbjct 2180 TAGGGATAGTTGGGGGCATTAGTA 2203 >seq61 Length=4110 Score = 114 bits (126), Expect = 2e-23 Identities = 79/88 (90%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct 87 TGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAGTAATGA 29 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| ||||| | |||| Sbjct 28 TTAATAGGGATAGTTGGGGGCATTAGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182043776