Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq211 190 2e-46 seq61 95.1 1e-17 >seq211 Length=6561 Score = 190 bits (210), Expect = 2e-46 Identities = 138/157 (88%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||| ||||||||| || ||| ||||| Sbjct 2049 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCATTCGCTTGAATA 2108 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct 2109 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG- 2166 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTA 157 |||||||| |||| ||||||| ||||| | |||| Sbjct 2167 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTA 2203 Score = 147 bits (162), Expect = 2e-33 Identities = 108/123 (88%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||||||||||||||| | ||||||||||||| |||||||||||||| ||||| Sbjct 2205 ATGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAA-GTAAT 2262 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||||||| ||||| | |||||| |||||||| |||||||||||||||||| Sbjct 2263 GATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATT 2322 Query 188 TAT 190 ||| Sbjct 2323 TAT 2325 >seq61 Length=4110 Score = 95.1 bits (104), Expect = 1e-17 Identities = 76/89 (85%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||||||||||||||||||| | ||||||||||||| |||||||||||||| |||||| Sbjct 87 TGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCG-AAGTAATG 30 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTA 157 || |||| ||||||| ||||| | |||| Sbjct 29 ATTAATAGGGATAGTTGGGGGCATTAGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511990268480