Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq172 194 4e-47 seq644 98.7 3e-18 >seq172 Length=1251 Score = 194 bits (214), Expect = 4e-47 Identities = 148/175 (85%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| ||| |||||||| | |||| || |||||||| Sbjct 1075 CGCGGGTAACCTGCATCTTCACAGGTATTAAAATTTCACCGGATCTCTCGTTGAGACAGC 1134 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||||||||||||| |||| ||| ||||| ||||||||||||||||||| Sbjct 1135 GCCCAAGTCGTTACGCCATTCGTGCGGGTCAGAATTTACCTGACAAGGAATTTCGCTACC 1194 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG 175 ||||||||||||| |||||||||||||||||| ||||||||| | | ||||||| Sbjct 1195 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCACAGCTTCG 1249 >seq644 Length=4262 Score = 98.7 bits (108), Expect = 3e-18 Identities = 184/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGT-GGAGACAGCGCCGCCATCGT 71 |||||| ||| | | ||||||||||||||| ||| | |||||||| ||||| Sbjct 1664 GCATCTGCACGGATAATTCAATTTCACTGAG-CTCATCTTGGAGACAGTAAGAGTATCGT 1722 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 || |||||| ||| | | | ||| | ||||| |||||||||||| |||| |||| Sbjct 1723 TAAACCATTCATGCGCGACCATAATTAGTGGCCAAGGTATTTCGCTACCTGAGGATCGTT 1782 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 || ||||| |||| |||||| || | ||| ||| ||| || |||| | | Sbjct 1783 ATAGTTACAACCGCTGTTTACTGGAGGTTCAATC---AGCACCGTATTAG-----TGCCT 1834 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | || || | || |||| | ||||| ||| | ||||| || | |||| | || ||| Sbjct 1835 CTCTTGACTTACCAGCACTGAGCAGGTATCAGTCTTTATACATCTAGTTTCCTATTAGCA 1894 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCG 278 || | ||||||| | |||||||||| Sbjct 1895 AAGACCGGTGTTTTAAGTAAACAGTCG 1921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260783823936