Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq172 300 3e-79 seq644 89.7 1e-15 >seq172 Length=1251 Score = 300 bits (332), Expect = 3e-79 Identities = 245/296 (83%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAAC 103 |||| ||| |||||||||| |||| | |||| |||||||| | |||| | | Sbjct 967 GGAGGCGCCGTTGGGATACCACCCTGATCGTATCTAGGTTCTAACCTGGTACCGTA-ATC 909 Query 104 CGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAA 163 || | ||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 908 CGGTATGGGGACAGTGTCAGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAA 849 Query 164 CGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAA 223 ||||||||||| ||| | ||||||| ||| |||||| ||| || | |||||||||||| Sbjct 848 CGGAGGCGCCCCAAGGTTCCCTCAGAATGGTTGGAAATCATTCGAAGAGTGCAAAGGCAG 789 Query 224 AAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATC 283 ||||| | |||||||||| ||| |||||| ||||||||||||||||||||||| ||||| Sbjct 788 AAGGGAGCTTGACTGCGAGACCTACAAGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATC 729 Query 284 CGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||| | | |||||| |||| |||||| ||||||||||||||||||||||||| Sbjct 728 CGGTGGTACCGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCTGGGGATA 673 >seq644 Length=4262 Score = 89.7 bits (98), Expect = 1e-15 Identities = 167/245 (68%), Gaps = 18/245 (7%) Strand=Plus/Minus Query 112 GGACAGTG-TCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| | | | ||||||||| ||||||||| |||||| | |||| ||||| Sbjct 1511 GGACAGTGATTAAT-GGGCAGTTTATCTGGGGCGGATTTCTCCCATATAGTACCGGAGAA 1453 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCA-TGCGCACA---------------GTG 214 | ||||| | || | |||||||||||||| || || | ||| Sbjct 1452 GTACAAAGGTCGGCTTAAATTGGATGGAAACCAATGGGCTAAAGATAGCCTAATTAAGTG 1393 Query 215 CAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274 || |||| ||| | || |||| | || |||||| ||| ||| |||| || | Sbjct 1392 TAATGGCATAAGCCGGCTTAACTGTAAGACTGACAAGTCATACAGATACGCAAGTAGGTC 1333 Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334 || |||||||| ||| | |||||| |||| |||||| ||| ||||||||||| || | Sbjct 1332 ATAGTGATCCGGTGGTCCATCATGGAATGGCCATCGCTCAACGAATAAAAGCTACGCTAG 1273 Query 335 GGATA 339 ||||| Sbjct 1272 GGATA 1268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982387395808