Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq209 259 1e-66 seq644 116 9e-24 >seq209 Length=1344 Score = 259 bits (286), Expect = 1e-66 Identities = 302/395 (76%), Gaps = 11/395 (3%) Strand=Plus/Plus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| | || ||||||| |||||||| || |||||| ||||| || |||| Sbjct 491 TTTTTCAACATTCGTGGGTTCGGGCCTCCAGTGCGT-GTTACCGCACCTT-CACCCTGGA 548 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA--CGCCCTAGTAA 146 || || |||||| | |||||| |||||||| ||| | |||| | ||||||| | | Sbjct 549 CAGGGG-TAGATCACACGGTTT-CGGGTCTACGTCCACGT-ACTATAGTCGCCCTATTCA 605 Query 147 GACTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205 |||||||||| |||| || |||| || || | | | |||| ||| ||| ||| Sbjct 606 GACTCGCTTT-CGCTGCGGCTCCGGCTTCTCACCTTAACCTTGCACGGGAACGTAACTCG 664 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 | | |||| ||||||||| |||| ||||||| ||| |||||| ||| |||||| Sbjct 665 CCGGTTCATTCTACAAAAGGCACGCCATCACCCAT-AAACAGGGCTCTGACTTCTTGTAA 723 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 ||| ||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||| Sbjct 724 GCACACGGTTTCAGGTTCTATTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCA 782 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 ||||||| ||||||||||||| | | ||||||||||||| | |||||||| ||| Sbjct 783 CGGTACTGTTTCACTATCGGTCGCTAGGGAGTATTTAGCCTTAGCAGATGGTCCTGCCAG 842 Query 386 ATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| || ||||| ||||| ||| ||||||| Sbjct 843 ATTCATACGGGGTTTCACGTGCCCCGCACTACTCG 877 >seq644 Length=4262 Score = 116 bits (128), Expect = 9e-24 Identities = 155/210 (74%), Gaps = 9/210 (4%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA----AAGTGGGCTCCC 254 ||| ||||||||||||||| ||||||||||||||| | | | || | | | || Sbjct 3015 TAACTCGCTGACCCATTATGCAAAAGGTACGCAGTTATCTTGTATTTAAACTCAGATTCC 3074 Query 255 A-CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTC 313 |||||| || ||| | |||||||||| |||||| | | || | |||||| Sbjct 3075 TGCTGCTTATAGAACTACCGGTTCAGGATCT-TTTCAC--CAGTTACCTACTTACTTTTC 3131 Query 314 GCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGA 373 ||||||||||||||||| |||||||||| ||| | | ||||||||||| ||||| Sbjct 3132 AACTTTCCCTCACGGTACTC-TTCACTATCGCTCAATACATCATATTTAGCCTTAGAGGA 3190 Query 374 TGGTCCCCCCATATTCAGACAAAGTTTCTC 403 |||| |||| |||||||||||| | |||| Sbjct 3191 TGGTTCCCCTATATTCAGACAAGTTATCTC 3220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241584070272