Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq172 116 3e-24 seq644 86.0 4e-15 >seq172 Length=1251 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | |||||||||||||| | || Sbjct 684 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGCCCGA 743 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| ||||||| | Sbjct 744 CTTTCGTCCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTCTGCCTTTGCACTCT 803 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 804 TCGAATGATTTCCAACC 820 >seq644 Length=4262 Score = 86.0 bits (94), Expect = 4e-15 Identities = 92/119 (77%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG-CCACCGGATCACTATGACCT 59 || ||||||| ||||||||||||||| ||||| | || | |||||||||||||||||||| Sbjct 1279 TAGCTTTTATTCGTTGAGCGATGGCCATTCCA-TGATGGACCACCGGATCACTATGACCT 1337 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||| || ||||| | |||| ||| || | |||| ||| ||||||| |||| Sbjct 1338 ACTTGCGTATCTGTATGACTTGTCAGTCTTACAGTTAAGCCGGCTTATGCCATTACACT 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351995766100