Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq332 425 1e-116 seq795 125 2e-26 >seq332 Length=1728 Score = 425 bits (470), Expect = 1e-116 Identities = 342/409 (84%), Gaps = 3/409 (1%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 581 TACCTGAGAAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 640 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | ||| ||| ||| ||||||| | || Sbjct 641 AAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGTCATTTAAGTCTGGTGT 700 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 ||||| | ||||||||| || | || | ||||||| | || |||||||| || Sbjct 701 TTAAGGCCAAGGCTCAACCTTGGTTC-GCACTGGAAACTGGGTGACTTGAGTGCAGAAGA 759 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 760 GGAGAGTGGAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAACACCAGTGG 819 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 |||||||| || |||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct 820 CGAAGGCGACTCTCTGGGCTGTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAG 879 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAA 360 ||||||||||||||||||||||||||||||||||||||| |||||||| ||| | | Sbjct 880 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATGCTAGGTGTTAGGG-GTTTCG 938 Query 361 GTGCTC-CGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | ||||||| || ||| || |||| ||||| ||||||||||| Sbjct 939 ATACCCTTGGTGCCGAAGTTAACACATTAAGCATTCCGCCTGGGGAGTA 987 >seq795 Length=9326 Score = 125 bits (138), Expect = 2e-26 Identities = 221/316 (70%), Gaps = 17/316 (5%) Strand=Plus/Minus Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88 ||||||||||| |||||||||||| |||| ||| |||| | |||| |||| ||| Sbjct 7884 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 7825 Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACT- 147 ||||| |||||| || || |||| | ||||||| ||| | ||| || | Sbjct 7824 AGGGTACGTAGGCTGTATCATAAGAC-----TGAAAGG-TATCG---AACTAAATGAATA 7774 Query 148 ---GCTTTTGA--AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTA 202 |||||| | |||| |||||||| | | || ||| |||| ||| || ||| Sbjct 7773 AGAGCTTTTCAGTAACTATGAAACTAGAGTGTAATGGAGGAAAGAGGAACTCCGAGAGTA 7714 Query 203 GCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGT 262 | | || ||| || ||| | ||| || | | ||||||||| ||| || ||| Sbjct 7713 GGGATGGAATCTGTTGATCCTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTA-ACTAA 7655 Query 263 A-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 | |||||| |||||| |||||| ||||||||||| |||||||| |||| ||||||| Sbjct 7654 ACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGAGACCCGTGTAGTCC 7595 Query 322 ACGCCGTAAACGATGA 337 | ||||||||||||| Sbjct 7594 ATACCGTAAACGATGA 7579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203184562944