Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20ambiguus_20[genbank_20GCA_5F000950595.1_202015-02-19] 1,283 sequences; 40,737,472 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq495 107 6e-21 seq1030 93.3 1e-16 seq969 84.2 7e-14 >seq495 Length=2906 Score = 107 bits (118), Expect = 6e-21 Identities = 160/236 (68%), Gaps = 46/236 (19%) Strand=Plus/Minus Query 112 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT 171 |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| Sbjct 726 GTAGCCGTTTCTCAGGCTCCCTCTACGGAATCGAACCCTAATTTCCAGTTACCCGTTGTA 667 Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 ||| ||| ||| |||| ||| ||| | ||||| Sbjct 666 GGCATTGTAAGCCTCTATTTTACAATC--------------------------TCAACCA 633 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG 291 |||||||||||||| || ||| ||||||||||||||||| | Sbjct 632 ---------CAAGGCCATGCGATCCGCTAAATTATTATGAATCACCAA---------ACT 591 Query 292 GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCAT 347 |||||||| || ||||||||| | ||||| || |||| |||||||| |||| Sbjct 590 GGCGTTGG--CTTCATCTAATAAGTGCACCCATTTATAAGTTTGGGTTTTTTGCAT 537 >seq1030 Length=55158 Score = 93.3 bits (102), Expect = 1e-16 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTAC-TATCAAATAAACG 404 ||||||| ||||||| |||| || ||||| || |||||| ||| ||||| ||| || Sbjct 41797 ATGTATTCGCTCTAGCATTAACAAGGTTAATCAAGTAGTATAGTATATATCACATAGACC 41856 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCAC 437 |||| ||||| |||||||||||||||||||||| Sbjct 41857 ATAATTGATTAAATGAGCCATTCGCAGTTTCAC 41889 >seq969 Length=37769 Score = 84.2 bits (92), Expect = 7e-14 Identities = 71/86 (83%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGG---TTTTTAGCATGT 349 ||||||| ||| ||||||||| | ||||| ||| |||| ||| ||||| |||| | Sbjct 20886 GCGTTGGCTTT--ATCTAATAAGTGCACCCATTCGTAAGTTTGGGGTTTTTTTTGCATTT 20829 Query 350 ATTAGCTCTAGAATTACCACGGTTAT 375 |||||||||||||||||||||||||| Sbjct 20828 ATTAGCTCTAGAATTACCACGGTTAT 20803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510380621568