Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq377 407 2e-111 seq403 230 4e-58 seq37 201 2e-49 >seq377 Length=12034 Score = 407 bits (450), Expect = 2e-111 Identities = 246/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 4107 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 4050 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4049 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 3990 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3989 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 3930 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3929 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCG 3870 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 3869 GCCATAGTCCCTCTAA 3854 >seq403 Length=9977 Score = 230 bits (254), Expect = 4e-58 Identities = 186/220 (85%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1811 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1868 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| | ||||| ||| || Sbjct 1869 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAGAGTTTCACAAGTTT 1928 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| || |||||||| | |||||||||||||||||| Sbjct 1929 ACCCAGTCATTTCGGACAAGG-GACCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 1987 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 1988 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 2027 Score = 230 bits (254), Expect = 4e-58 Identities = 186/220 (85%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 5528 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 5585 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| | ||||| ||| || Sbjct 5586 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAGAGTTTCACAAGTTT 5645 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| || |||||||| | |||||||||||||||||| Sbjct 5646 ACCCAGTCATTTCGGACAAGG-GACCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 5704 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 |||| ||||||||||||||||||||||||||||||||||| Sbjct 5705 GCCCGGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 5744 >seq37 Length=183686 Score = 201 bits (222), Expect = 2e-49 Identities = 153/178 (86%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109 ||||||||| ||||||||||| ||| |||| ||||| ||||||| || |||| |||| | Sbjct 83271 CTAGGAATT-CCTCGTTGAAGTGCAATAATTACAATGCTCTATCCTCAGCACGGTGAAGT 83329 Query 110 TTCAAA-GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTA 168 |||||| | |||||| || | |||| ||||| ||| ||||| ||| | |||||||||| Sbjct 83330 TTCAAAAGTTTACCCAAACTTTCCGGCTAAGGTTATAAACTCGCTGATTTCATCAGTGTA 83389 Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 83390 GCGCGCATGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTT 83447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994019015