Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq377 140 2e-31 seq403 122 5e-26 >seq377 Length=12034 Score = 140 bits (154), Expect = 2e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 3577 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 3518 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 3517 GATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 3461 >seq403 Length=9977 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 2344 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 2401 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 2402 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 2461 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 6061 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 6118 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 6119 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 6178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397857190