Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq403 286 6e-75 seq377 244 2e-62 >seq403 Length=9977 Score = 286 bits (316), Expect = 6e-75 Identities = 219/257 (85%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 2719 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 2660 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | Sbjct 2659 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 2600 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 2599 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 2540 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 2539 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 2480 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 2479 -AGAACGAAGGTTAGGG 2464 Score = 286 bits (316), Expect = 6e-75 Identities = 219/257 (85%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 6436 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 6377 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | Sbjct 6376 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 6317 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 6316 CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 6257 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 6256 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 6197 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 6196 -AGAACGAAGGTTAGGG 6181 >seq377 Length=12034 Score = 244 bits (270), Expect = 2e-62 Identities = 204/247 (83%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 || |||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||| Sbjct 3215 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAGGCCTACGCTTGTATACATTAGCATG 3274 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 | |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||| Sbjct 3275 GGATAACATCATAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATT 3333 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 || ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 3334 AACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATG 3393 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 3394 AAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 3452 Query 312 TTAGGGG 318 || |||| Sbjct 3453 TTGGGGG 3459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192486208