Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 6e-14 seq364 75.2 3e-11 >seq16 Length=242015 Score = 84.2 bits (92), Expect = 6e-14 Identities = 208/311 (67%), Gaps = 11/311 (4%) Strand=Plus/Plus Query 31 CGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAA 90 ||||||||||| |||||||||||| || | |||| ||| || |||| |||| ||| Sbjct 232986 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 233045 Query 91 AGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC-CGGGCTTAACCTGGG-AAT 148 || || || |||| || |||||| ||||| || || || || || Sbjct 233046 AGGGTACGTAGGCTGTATCATAAGAC-----TGAAAGGTATCGAACTAAA--TGAATAAG 233098 Query 149 TGCATTT--GTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGC 206 || ||| || ||| |||||||||| |||| | |||| ||| | |||| Sbjct 233099 AGCTTTTCAGTAACTATGAAACTAGAGTGTAATGGAGGAAAGAGGAACTCCGAGAGTAGG 233158 Query 207 AGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACA 266 || ||| || ||| ||| || | | | ||||||||| | || |||| Sbjct 233159 GATGGAATCTGTTGATCCTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTAACTAAACA 233218 Query 267 CTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACG 326 |||||||| | | ||||||| ||||||||||| |||||||| |||| |||||||| Sbjct 233219 CTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGAGACCCGTGTAGTCCATA 233278 Query 327 CCCTAAACGAT 337 || |||||||| Sbjct 233279 CCGTAAACGAT 233289 >seq364 Length=17594 Score = 75.2 bits (82), Expect = 3e-11 Identities = 119/171 (70%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 |||||| | | ||||| ||||||| | | | | || ||| || | | ||||| | Sbjct 608 ACTAGAATCTAATAGAGGATAGTGGAATGCTAGGAGGAGGGATGATATCCATTGATATCT 667 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | ||||||| || |||||| ||| | | | || | ||||||||| | | ||||| Sbjct 668 AGCGGAACACTAAAGGCGAAAGCAACTATCCAGCTAAAGATTGACGCTCAGGGATGAAAG 727 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||| ||||||||||| |||||||| || ||||| || Sbjct 728 TCTGGGGAGCAAAACAGATTAGATACCTGTGTAGTCCAGACCGTAAACTAT 778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289589412384