Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq16 109 8e-22 seq238 73.4 5e-11 >seq16 Length=242015 Score = 109 bits (120), Expect = 8e-22 Identities = 168/239 (70%), Gaps = 23/239 (10%) Strand=Plus/Minus Query 10 CCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTG 69 ||| ||| | ||||| |||||| |||||||| | || || | || ||| |||| ||| Sbjct 229944 CCAGCACTGAGCAGGTATCAGTCTTTATACATCTAGTTTCC-TATTAGCAAAGACCGGTG 229886 Query 70 TTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGT 129 |||| |||||||||||| | |||||||| ||| || | || | || | |||| Sbjct 229885 TTTTAAGTAAACAGTCGTACTCTTCTATTCTGTGCCACGATCA-----TAAAAA--TCGT 229833 Query 130 TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAAC 189 || ||||||||||||||||||| | ||||||||||| |||||| | Sbjct 229832 --------------ACTCCTTCTCCCGAAGTTACGGAGTCATTTTGCCGAGTTCCTTCAA 229787 Query 190 CACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| | | |||||||| |||| |||||| | ||| ||||||||||| |||| Sbjct 229786 GATGATTCGCTC-AACGCCTTGGTATATTCTACCAGCAGACCAGTGTCGGTTTAGGGTA 229729 >seq238 Length=48937 Score = 73.4 bits (80), Expect = 5e-11 Identities = 72/92 (78%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 157 AAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATT 216 || ||||||| || |||||||| |||||| || | || | | | |||||||||||| Sbjct 6424 AACTTACGGGCACAATTTGCCGAGTTCCTTCACAAGCATTATCTCTA-CGCCTTAGTATT 6482 Query 217 CTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||||||| ||||||||||||||| |||| Sbjct 6483 CTCTACCTACGAACCTGTGTCGGTTTAGGGTA 6514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694394477133