Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 3e-18 seq238 96.9 9e-18 >seq16 Length=242015 Score = 98.7 bits (108), Expect = 3e-18 Identities = 184/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGT-GGAGACAGCGCCGCCATCGT 71 |||||| ||| | | ||||||||||||||| ||| | |||||||| ||||| Sbjct 230126 GCATCTGCACGGATAATTCAATTTCACTGAG-CTCATCTTGGAGACAGTAAGAGTATCGT 230068 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 || |||||| ||| | | | ||| | ||||| |||||||||||| |||| |||| Sbjct 230067 TAAACCATTCATGCGCGACCATAATTAGTGGCCAAGGTATTTCGCTACCTGAGGATCGTT 230008 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 || ||||| |||| |||||| || | ||| ||| ||| || |||| | | Sbjct 230007 ATAGTTACAACCGCTGTTTACTGGAGGTTCAATC---AGCACCGTATTAG-----TGCCT 229956 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | || || | || |||| | ||||| ||| | ||||| || | |||| | || ||| Sbjct 229955 CTCTTGACTTACCAGCACTGAGCAGGTATCAGTCTTTATACATCTAGTTTCCTATTAGCA 229896 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCG 278 || | ||||||| | |||||||||| Sbjct 229895 AAGACCGGTGTTTTAAGTAAACAGTCG 229869 >seq238 Length=48937 Score = 96.9 bits (106), Expect = 9e-18 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || |||||| ||| || | ||||||||||||||| | ||||||||||| ||| Sbjct 6064 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 6123 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 | |||||| ||||| |||||| | | ||| | |||||||||||||||| || || Sbjct 6124 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 6182 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC 161 | |||| |||| | ||||| || ||| ||| || Sbjct 6183 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC 6217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260789648832