Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq377 309 5e-82 seq403 293 4e-77 seq37 129 9e-28 >seq377 Length=12034 Score = 309 bits (342), Expect = 5e-82 Identities = 227/261 (87%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3963 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3904 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| || Sbjct 3903 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTAG 3846 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 |||| | || | | | |||| |||||||| | ||||||||||||||| ||||| Sbjct 3845 CCACGGAGGATCACCTCCGCGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 3786 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3785 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 3726 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 3725 AGAAAGAGCTCTCAGTCTGTC 3705 >seq403 Length=9977 Score = 293 bits (324), Expect = 4e-77 Identities = 224/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 1955 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAGA 2014 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||| | ||||| || | | | ||||||||||||||||| || Sbjct 2015 CCTGTTATTGCCTTTTGCCTCCATCACCTAAACGGTCGATAGTCCCTCTAAGAAGACATA 2074 Query 119 -GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | ||||| | | ||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 2075 AGGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGGA 2134 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2135 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 2194 Query 237 AAGAAAGAGCTATCAATCTGTC 258 | ||||| || ||||||||||| Sbjct 2195 ATGAAAGCGCCATCAATCTGTC 2216 Score = 293 bits (324), Expect = 4e-77 Identities = 224/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 5672 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAGA 5731 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||| | ||||| || | | | ||||||||||||||||| || Sbjct 5732 CCTGTTATTGCCTTTTGCCTCCATCACCTAAACGGTCGATAGTCCCTCTAAGAAGACATA 5791 Query 119 -GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | ||||| | | ||| | | ||||||||||||| ||||||||||||||||||||| Sbjct 5792 AGGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGGA 5851 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5852 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 5911 Query 237 AAGAAAGAGCTATCAATCTGTC 258 | ||||| || ||||||||||| Sbjct 5912 ATGAAAGCGCCATCAATCTGTC 5933 >seq37 Length=183686 Score = 129 bits (142), Expect = 9e-28 Identities = 94/109 (86%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 83368 ACTCGCTGATTTCATCAGTGTAGCGCGCATGCGGCCCAGAACATCTAAGGGCATCACAGA 83427 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTA 110 ||||||||||||| |||||| | | | | |||||| |||||| ||||| Sbjct 83428 CCTGTTATTGCCTAAAACTTTCTTCTGGTTGAAGCCGATAGTCTCTCTA 83476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796793662701