Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq238 120 8e-25 seq16 116 9e-24 >seq238 Length=48937 Score = 120 bits (132), Expect = 8e-25 Identities = 152/204 (75%), Gaps = 10/204 (5%) Strand=Plus/Plus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC--CCAACAAAGTGGGCTC 252 ||| ||| ||||||||||||||| ||||||||||| |||| | || || ||| Sbjct 7464 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTCTTACTAAAA---CTC 7520 Query 253 CCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTCTTT 311 | ||||||| || | ||| |||||| ||||||||||| | ||| | | |||| Sbjct 7521 CAACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TACTTT 7577 Query 312 TCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAG 371 || |||||| |||||| |||| |||||||||| | | || || |||||||||||| Sbjct 7578 TCACCTTTCACTCACGTTACTC-TTCACTATCGCTAGATATGTTATACTTAGCCTTGGAG 7636 Query 372 GATGGTCCCCCCATATTCAGACAA 395 |||||| ||||| |||||| |||| Sbjct 7637 GATGGTACCCCCTTATTCATACAA 7660 >seq16 Length=242015 Score = 116 bits (128), Expect = 9e-24 Identities = 155/210 (74%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA----AAGTGGGCTCCC 254 ||| ||||||||||||||| ||||||||||||||| | | | || | | | || Sbjct 228775 TAACTCGCTGACCCATTATGCAAAAGGTACGCAGTTATCTTGTATTTAAACTCAGATTCC 228716 Query 255 A-CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTC 313 |||||| || ||| | |||||||||| |||||| | | || | |||||| Sbjct 228715 TGCTGCTTATAGAACTACCGGTTCAGGATCT-TTTCAC--CAGTTACCTACTTACTTTTC 228659 Query 314 GCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGA 373 ||||||||||||||||| |||||||||| ||| | | ||||||||||| ||||| Sbjct 228658 AACTTTCCCTCACGGTACTC-TTCACTATCGCTCAATACATCATATTTAGCCTTAGAGGA 228600 Query 374 TGGTCCCCCCATATTCAGACAAAGTTTCTC 403 |||| |||| |||||||||||| | |||| Sbjct 228599 TGGTTCCCCTATATTCAGACAAGTTATCTC 228570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241589806464