Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq403 197 1e-48 seq377 138 1e-30 >seq403 Length=9977 Score = 197 bits (218), Expect = 1e-48 Identities = 158/188 (84%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAAT 59 |||||||||||| |||||||||||||||||||| |||||||||||||| | | | ||||| Sbjct 2719 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 2660 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 | |||| |||||||||| ||||||||||| ||||||||||||||| ||||||||| || | Sbjct 2659 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 2600 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| || | ||| || |||||| | |||||| | | |||||||||| Sbjct 2599 -CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATT 2541 Query 180 CTTGGATT 187 |||||||| Sbjct 2540 CTTGGATT 2533 Score = 197 bits (218), Expect = 1e-48 Identities = 158/188 (84%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAAT 59 |||||||||||| |||||||||||||||||||| |||||||||||||| | | | ||||| Sbjct 6436 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 6377 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 | |||| |||||||||| ||||||||||| ||||||||||||||| ||||||||| || | Sbjct 6376 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 6317 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| || | ||| || |||||| | |||||| | | |||||||||| Sbjct 6316 -CCGTAATGATTAACAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATT 6258 Query 180 CTTGGATT 187 |||||||| Sbjct 6257 CTTGGATT 6250 >seq377 Length=12034 Score = 138 bits (152), Expect = 1e-30 Identities = 140/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70 || |||||||||| ||||||||| | ||||||||||||| ||| | |||||||| |||| Sbjct 3215 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAGGCCTACGCTTGTATACATTAGCATG 3274 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | |||| | |||||| | |||| ||||| ||| || | ||| || |||||||| Sbjct 3275 GGATAACATCATAGGA-TTTCGGTCCTATTGTGTTGGCCTTCGGGATCG-GAGTAATGAT 3332 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 3333 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 3392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511995927840