Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 3e-18 seq238 82.4 7e-14 >seq16 Length=242015 Score = 96.9 bits (106), Expect = 3e-18 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||| |||||| | ||||||||||||||||||||| ||| || | ||| Sbjct 230499 GTTGAGCGATGGCCATTCCATGATGGACCACCGGATCACTATGACCTACTTGCGTATCTG 230440 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 || |||| ||| |||| ||||| |||||||||||| |||| Sbjct 230439 TATGACTTGTCAGTCTTACAGTTAAGCCGGCTTATGCCATTACACT 230394 >seq238 Length=48937 Score = 82.4 bits (90), Expect = 7e-14 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||| || ||||||| ||| |||||||||||||| ||| ||| || | ||| Sbjct 5490 TTGAGCGATGACCATTCCATTATGAATCACCGGATCACTATATCCTACTTGCGTATCTGA 5549 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATT 124 |||| | ||| ||| ||||||||| |||||| | ||| Sbjct 5550 TCGACCTATCAGTCTTTCAGTCAAGCATGCTTATACTATT 5589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473596233252