Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq403 318 1e-84 seq377 306 7e-81 seq37 233 4e-59 >seq403 Length=9977 Score = 318 bits (352), Expect = 1e-84 Identities = 262/315 (83%), Gaps = 7/315 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCC---GGCTTC 75 || ||||||||| ||||||||||||| | || | ||| | || | | | |||| Sbjct 2125 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACATTTTGTTGGCCCCTTATGTCTTC 2066 Query 76 TTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 ||||||||||||||| | | || |||||| | |||||||||||||||||||||| Sbjct 2065 TTAGAGGGACTATCGACCGTTTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGATG 2006 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 ||||||||||||| |||| ||||||||||||||||||||||| |||||||| || ||| Sbjct 2005 CCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGGTC-CCT 1947 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 || ||| || | |||||||| ||||| ||||||||||||||||||||| |||| ||| || Sbjct 1946 TGTCCGAAATGACTGGGTAAACTTGTGAAACTCTGTCGTGCTGGGGATGGAGCTTTGTAA 1887 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 || ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct 1886 TTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACG 1827 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 1826 TCCCTGCCCTTTGTA 1812 Score = 318 bits (352), Expect = 1e-84 Identities = 262/315 (83%), Gaps = 7/315 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCC---GGCTTC 75 || ||||||||| ||||||||||||| | || | ||| | || | | | |||| Sbjct 5842 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACATTTTGTTGGCCCCTTATGTCTTC 5783 Query 76 TTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 ||||||||||||||| | | || |||||| | |||||||||||||||||||||| Sbjct 5782 TTAGAGGGACTATCGACCGTTTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGATG 5723 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 ||||||||||||| |||| ||||||||||||||||||||||| |||||||| || ||| Sbjct 5722 CCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGGTC-CCT 5664 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 || ||| || | |||||||| ||||| ||||||||||||||||||||| |||| ||| || Sbjct 5663 TGTCCGAAATGACTGGGTAAACTTGTGAAACTCTGTCGTGCTGGGGATGGAGCTTTGTAA 5604 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 || ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| Sbjct 5603 TTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACG 5544 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 5543 TCCCTGCCCTTTGTA 5529 >seq377 Length=12034 Score = 306 bits (338), Expect = 7e-81 Identities = 226/260 (87%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||||||| Sbjct 3849 GCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGGTCTG 3907 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| | |||||||| || Sbjct 3908 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTAT 3967 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| ||| Sbjct 3968 AGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCAT 4026 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| Sbjct 4027 TGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGA 4086 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 4087 CTACGTCCCTGCCCTTTGTA 4106 >seq37 Length=183686 Score = 233 bits (258), Expect = 4e-59 Identities = 176/206 (85%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 77 TAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 ||||| ||||||||||| ||| | || | |||||| |||||||||||||||||||||||| Sbjct 83476 TAGAGAGACTATCGGCTTCAACCAGAAGAAAGTTTTAGGCAATAACAGGTCTGTGATGCC 83417 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||||||||||||||||||| |||||||||||||| | || |||||| || ||||| Sbjct 83416 CTTAGATGTTCTGGGCCGCATGCGCGCTACACTGATGAAATCAGCGAGTTTATAACCTTA 83357 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||||| || ||||||| ||| | ||||| ||||||| ||||||||||||| |||| Sbjct 83356 GCCGGAAAGTTTGGGTAAACTTTTGAAACTTCACCGTGCTGAGGATAGAGCATTGTAATT 83297 Query 256 ATTGCTCTTCAACGAGGAATGCCTAG 281 ||||| |||||||||||||| ||||| Sbjct 83296 ATTGCACTTCAACGAGGAATTCCTAG 83271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192223488