Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq408 704 0.0 seq377 681 0.0 seq16 78.8 3e-12 >seq408 Length=9762 Score = 704 bits (780), Expect = 0.0 Identities = 486/540 (90%), Gaps = 10/540 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 9201 CTTTTATTCTACACGAGATTTCTGTTCTCGTTGAGTCCTCCTTAGGACACCTGCGTTATC 9260 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||| ||||||||||| ||| || || Sbjct 9261 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATAACGTGGGTC 9320 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATG-GTCGGTGAAGAC-CAGTTCCGCTTCATT 184 | ||||| ||||| | |||| || ||| || ||| || | || ||| ||| Sbjct 9321 ACATC-CGAAGATGCTTAATACTAGAAGGTGAGTCT-TGC-GACTCAATCCCACTTAATT 9377 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct 9378 ATTTAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACT 9434 Query 245 TATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||| Sbjct 9435 TATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 9493 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 9494 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 9553 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9554 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 9613 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9614 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 9673 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 9674 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 9733 >seq377 Length=12034 Score = 681 bits (754), Expect = 0.0 Identities = 473/533 (89%), Gaps = 9/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 7642 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 7583 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 7582 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 7523 Query 127 GGCCCGCGAAGGAC---CTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCA 182 | || | | | | ||| | | ||| || || | || || | ||||| |||| Sbjct 7522 GACCGACAGATGCCGGTCTTGGGTCTAAAAAGAGG--GGCGTAGCCCCGCTTCCGATTCA 7465 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||| |||||| ||||||| Sbjct 7464 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACCGTTGCCGAA---GCTCCCA 7408 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7407 CTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 7348 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 7347 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 7288 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7287 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 7228 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7227 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 7168 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 7167 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATC 7115 >seq16 Length=242015 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||| || | ||||||| ||||||||||||| | ||||||| | | ||| |||| Sbjct 230084 GACAGTAAGAGTATCGTTAAACCATTCATGCGCGACCATAATTAGTGGCCAAGGTATTTC 230025 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466 ||||||| | || || |||||||| |||| |||||| Sbjct 230024 GCTACCTGAGGATCGTTATAGTTACAACCGCTGTTTAC 229987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635186575008