Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 2e-15 seq238 77.0 1e-11 >seq16 Length=242015 Score = 89.7 bits (98), Expect = 2e-15 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 331 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 |||||| || || | ||||||||| | || | | ||||||| | | | ||||| Sbjct 230126 GCATCTGCACGGATAATTCAATTTCACTGAGCTCATCTTGGAGACAGTAAGAGTATCGTT 230067 Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 450 | |||||| ||| | | | ||| | ||||| |||||||||||| ||||| |||| Sbjct 230066 AAACCATTCATGCGCGACCATAATTAGTGGCCAAGGTATTTCGCTACCTGAGGATCGTTA 230007 Query 451 TAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 ||||||| ||||| ||||||||| | |||||| Sbjct 230006 TAGTTACAACCGCTGTTTACTGGAGGTTCAAT 229975 >seq238 Length=48937 Score = 77.0 bits (84), Expect = 1e-11 Identities = 145/211 (69%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 275 CAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| ||||||| ||| ||| | | ||||||| |||| | | | || ||| Sbjct 6013 CAATATCAAGCTACAGTAAAGCTGCATAGGGTCTTCCCGTCTAACTGAAGGTAAACCGCA 6072 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 ||| || || | ||||||||| | | | || |||||||||||| |||||| Sbjct 6073 TCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCCA-CGTTACC 6131 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 ||||| |||||| | | ||| | |||||||||||||||| || ||| |||||| Sbjct 6132 TCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGATCCTTATAG 6191 Query 454 TTACCACCGCCGTTTACTGGGGCTTCAATTA 484 ||| |||||| || || ||| ||| ||| Sbjct 6192 TTAAGACCGCCATTCACCATGGCATCAGTTA 6222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702386023296