Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mucor_20circinelloides_20[genbank_20GCA_5F001276145.1_202015-08-31] 821 sequences; 35,338,886 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq408 143 4e-32 seq377 143 4e-32 seq403 93.3 7e-17 >seq408 Length=9762 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 8875 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 8818 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 8817 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 8760 >seq377 Length=12034 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 7968 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 8025 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 8026 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 8083 Score = 107 bits (118), Expect = 3e-21 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 3 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 60 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| || | Sbjct 61 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 120 Query 121 GAA 123 ||| Sbjct 121 GAA 123 >seq403 Length=9977 Score = 93.3 bits (102), Expect = 7e-17 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || ||| | |||||||| || || | |||| | |||||| Sbjct 9817 GTACGAGAGGAACTGTTGA-TTC-GTGTAATTGGTCTTGGCCGTTGTCCAATTGGGCAGT 9760 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || |||||||||||| ||| ||| ||||||||||||||||||| ||||||| Sbjct 9759 GCGGCGAAGCTACCACACGCTAGATAATGGCTGAACGCCTCTAAGCCAGAATC 9707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193484544