Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1762 80.6 1e-13 seq1113 80.6 1e-13 seq878 80.6 1e-13 seq838 80.6 1e-13 seq837 80.6 1e-13 seq999 77.0 1e-12 >seq1762 Length=16400 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 3412 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 3468 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 13171 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 13227 >seq1113 Length=144890 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 22295 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 22239 >seq878 Length=2566 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 2160 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 2104 >seq838 Length=3790 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 1763 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 1707 >seq837 Length=3795 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 3476 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 3532 >seq999 Length=908295 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||| ||||||||| |||||||||| |||||||||||||||| ||||||||| || Sbjct 722424 GGAAATGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 722480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230396070960