Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1762 129 1e-27 seq905 129 1e-27 seq845 129 1e-27 seq777 129 1e-27 seq769 129 1e-27 seq614 129 1e-27 >seq1762 Length=16400 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 6544 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 6601 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 6602 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6661 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 6662 AAACGCGACGATT 6674 Score = 93.3 bits (102), Expect = 7e-17 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 16302 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 16359 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCT 100 |||||||||||||||| | ||||||||||||||||||| Sbjct 16360 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCT 16399 >seq905 Length=1307 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 505 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 448 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 447 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 388 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 387 AAACGCGACGATT 375 >seq845 Length=3533 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 3099 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 3042 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 3041 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2982 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 2981 AAACGCGACGATT 2969 >seq777 Length=5067 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 1527 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 1584 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 1585 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1644 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 1645 AAACGCGACGATT 1657 >seq769 Length=5189 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 3060 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 3117 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 3118 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 3177 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 3178 AAACGCGACGATT 3190 >seq614 Length=7828 Score = 129 bits (142), Expect = 1e-27 Identities = 110/133 (83%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | ||||||||| ||||||| | ||| || ||| Sbjct 6371 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTATTTGCGGTTAGTTGAAAAGCTAGT 6314 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | Sbjct 6313 GCCGCGAAGCTACCATGCGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6254 Query 121 GAACGGGGTGATT 133 |||| | |||| Sbjct 6253 AAACGCGACGATT 6241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819185564416